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The Probability of a Gene Tree Topology within a Phylogenetic Network with Applications to Hybridization Detection273
Neutral forces acting on intragenomic variability shape the Escherichia coli regulatory network topology200
Publication Culture in Computing Research196
An Evaluation of Methods for Inferring Boolean Networks from Time-Series Data182
Iterative Temporal Motion Planning for Hybrid Systems in Partially Unknown Environments173
Binding Modes of Peptidomimetics Designed to Inhibit STAT3171
Inference of reticulate evolutionary histories by maximum likelihood: the performance of information criteria163
Gene Duplicability-Connectivity-Complexity across Organisms and a Neutral Evolutionary Explanation160
Boosting forward-time population genetic simulators through genotype compression157
Parsimonious Inference of Hybridization in the Presence of Incomplete Lineage Sorting156

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