Now showing items 24-43 of 66

    • Evolutionary profiling reveals the heterogeneous origins of classes of human disease genes: implications for modeling disease genetics in animals 

      Maxwell, Evan K.; Schnitzler, Christine E.; Havlak, Paul; Putnam, Nicholas H.; Nguyen, Anh-Dao; Moreland, R. Travis (2014)
      Background: The recent expansion of whole-genome sequence data available from diverse animal lineages provides an opportunity to investigate the evolutionary origins of specific classes of human disease genes. Previous ...
    • Experimental evidence that both parties benefit in a facultative plant-spider mutualism 

      Whitney, Kenneth D (2004-06)
      Spiders are known to influence plant fitness, and vice versa. Yet, it has not been appreciated that these facultative relationships can be mutualistic. I examined the interaction between Phryganoporus candidus, a subsocial ...
    • Facilitation and Competition among Invasive Plants: A Field Experiment with Alligatorweed and Water Hyacinth 

      Wundrow, Emily J.; Carrillo, Juli; Gabler, Christopher A.; Horn, Katherine C.; Siemann, Evan (2012)
      Ecosystems that are heavily invaded by an exotic species often contain abundant populations of other invasive species. This may reflect shared responses to a common factor, but may also reflect positive interactions among ...
    • The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima 

      Chipman, Ariel D.; Ferrier, David E.K.; Brena, Carlo; Qu, Jiaxin; Hughes, Daniel S.T.; Schrӧder, Reinhard; Torres-Oliva, Montserrat; Znassi, Nadia; Jiang, Huaiyang; Almeida, Francisca C.; Alonso, Claudio R.; Apostolou, Zivkos; Aqrawi, Peshtewani; Arthur, Wallace; Barna, Jennifer C.J.; Blankenburg, Kerstin P.; Brites, Daniela; Capella-Gutiérrez, Salvador; Coyle, Marcus; Dearden, Peter K.; Du Pasquier, Louis; Duncan, Elizabeth J.; Ebert, Dieter; Eibner, Cornelius; Erikson, Galina; Evans, Peter D.; Extavour, Cassandra G.; Francisco, Liezl; Gabaldón, Toni; Gillis, William J.; Goodwin-Horn, Elizabeth A.; Green, Jack E.; Griffiths-Jones, Sam; Grimmelikhuijzen, Cornelis J.P.; Gubbala, Sai; Guigó, Roderic; Han, Yi; Hauser, Frank; Havlak, Paul; Hayden, Luke; Helbing, Sophie; Holder, Michael; Hui, Jerome H.L.; Hunn, Julia P.; Hunnekuhl, Vera S.; Jackson, LaRonda; Javaid, Mehwish; Jhangiani, Shalini N.; Jiggins, Francis M.; Jones, Tamsin E.; Kaiser, Tobias S.; Kalra, Divya; Kenny, Nathan J.; Korchina, Viktoriya; Kovar, Christie L.; Kraus, F. Bernhard; Lapraz, François; Lee, Sandra L.; Lv, Jie; Mandapat, Christigale; Manning, Gerard; Mariotti, Marco; Mata, Robert; Mathew, Tittu; Neumann, Tobias; Newsham, Irene; Ngo, Dinh N.; Ninova, Maria; Okwuonu, Geoffrey; Ongeri, Fiona; Palmer, William J.; Patil, Shobha; Patraquim, Pedro; Pham, Christopher; Pu, Ling-Ling; Putman, Nicholas H.; Rabouille, Catherine; Ramos, Olivia Mendivil; Rhodes, Adelaide C.; Robertson, Helen E.; Robertson, Hugh M.; Ronshaugen, Matthew; Rozas, Julio; Saada, Nehad; Sánchez-Gracia, Alejandro; Scherer, Steven E.; Schurko, Andrew M.; Siggens, Kenneth W.; Simmons, DeNard; Stief, Anna; Stolle, Eckart; Telford, Maximilian J.; Tessmar-Raible, Kristin; Thornton, Rebecca; van der Zee, Maurijn; von Haeseler, Arndt; Williams, James M.; Willis, Judith H.; Wu, Yuanqing; Zou, Xiaoyan; Lawson, Daniel; Muzny, Donna M.; Worley, Kim C.; Gibbs, Richard A.; Akam, Michael; Richards, Stephen (2014)
      Myriapods (e.g., centipedes and millipedes) display a simple homonomous body plan relative to other arthropods. All members of the class are terrestrial, but they attained terrestriality independently of insects. Myriapoda ...
    • Fungal Symbionts as Manipulators of Plant Reproductive Biology 

      Gorischek, Alexander M.; Afkhami, Michelle E.; Seifert, Elizabeth K.; Rudgers, Jennifer A. (2013-04)
      Symbioses have shaped the evolution of life, most notably through the fixation of heritable symbionts into organelles. The inheritance of symbionts promotes mutualism and fixation by coupling partner fitness. However, ...
    • Genetic variation in anti-herbivore chemical defences in an invasive plant 

      Wang, Yi; Siemann, Evan; Wheeler, Gregory S.; Zhu, Lin; Gu, Xue; Ding, Jianqing (2012)
    • The Genome of the Ctenophore Mnemiopsis leidyi and Its Implications for Cell Type Evolution 

      Ryan, Joseph F.; Pang, Kevin; Schnitzler, Christine E.; Nguyen, Anh-Dao; Moreland, R. Travis; Simmons, David K.; Koch, Bernard J.; Francis, Warren R.; Havlak, Paul; NISC Comparative Sequencing Program; Smith, Stephen A.; Putnam, Nicholas H.; Haddock, Steven H.D.; Dunn, Casey W.; Wolfsberg, Tyra G.; Mullikin, James C.; Martindale, Mark Q.; Baxevanis, Andreas D. (2013)
      An understanding of ctenophore biology is critical for reconstructing events that occurred early in animal evolution. Toward this goal, we have sequenced, assembled, and annotated the genome of the ctenophore Mnemiopsis ...
    • Geographic and population variation in pollinating seed-consuming interactions between senita cacti (Lophocereus schottii) and senita moths (Upiga virescens) 

      Fleming, Theodore H.; Holland, J. Nathaniel (1999)
      Interspecific interactions can vary within and among populations and geographic locations. This variation can subsequently influence the evolution and coevolution of species interactions. We investigated population and ...
    • Ghosts of Habitats Past: Environmental Carry-Over Effects Drive Population Dynamics in Novel Habitat 

      Van Allen, Benjamin G.; Rudolf, Volker H.W. (2013-05)
      The phenotype of adults can be strongly influenced by the environmental conditions experienced during development. Consequently, variation in habitat quality across space and through time also leads to differences in the ...
    • Habitat use and resource tracking by African Ceratogymna hornbills: implications for seed dispersal and forest conservation 

      Smith, Thomas B.; Whitney, Kenneth D. (1998)
      Conservation of tropical forests requires an understanding of the seasonal patterns of abundance and distribution of important seed dispersers. In the forests of Central Africa, three species of hornbills in the genus ...
    • Hemichordate genomes and deuterostome origins 

      Simakov, Oleg; Kawashima, Takeshi; Marlétaz, Ferdinand; Jenkins, Jerry; Koyanagi, Ryo; Mitros, Therese; Hisata, Kanako; Bredeson, Jessen; Shoguchi, Eiichi; Gyoja, Fuki; Yue, Jia-Xing; Chen, Yi-Chih; Freeman, Robert M.; Sasaki, Akane; Hikosaka-Katayama, Tomoe; Sato, Atsuko; Fujie, Manabu; Baughman, Kenneth W.; Levine, Judith; Gonzalez, Paul; Cameron, Christopher; Fritzenwanker, Jens H.; Pani, Ariel M.; Goto, Hiroki; Kanda, Miyuki; Arakaki, Nana; Yamasaki, Shinichi; Qu, Jiaxin; Cree, Andrew; Ding, Yan; Dinh, Huyen H.; Dugan, Shannon; Holder, Michael; Jhangiani, Shalini N.; Kovar, Christie L.; Lee, Sandra L.; Lewis, Lora R.; Morton, Donna; Nazareth, Lynne V.; Okwuonu, Geoffrey; Santibanez, Jireh; Chen, Rui; Richards, Stephen; Muzny, Donna M.; Gillis, Andrew; Peshkin, Leonid; Wu, Michael; Humphreys, Tom; Su, Yi-Hsien; Putnam, Nicholas H.; Schmutz, Jeremy; Fujiyama, Asao; Yu, Jr-Kai; Tagawa, Kunifumi; Worley, Kim C.; Gibbs, Richard A.; Kirschner, Marc W.; Lowe, Christopher J.; Satoh, Noriyuki; Rokhsar, Daniel S.; Gerhart, John (2015)
      Acorn worms, also known as enteropneust (literally, ‘gut-breathing’) hemichordates, are marine invertebrates that share features with echinoderms and chordates. Together, these three phyla comprise the deuterostomes. Here ...
    • Herbivore-induced changes in plant carbon allocation: Assessment of below-ground C fluxes using carbon-14 

      Crossley, D.A. Jr; Cheng, Weixin; Holland, J. Nathaniel (1996-03)
      Effects of above-ground herbivory on shortterm plant carbon allocation were studied using maize (Zea mays) and a generalist lubber grasshopper (Romalea guttata). We hypothesized that above-ground herbivory stimulates ...
    • An HMM-Based Comparative Genomic Framework for Detecting Introgression in Eukaryotes 

      Liu, Kevin J.; Dai, Jingxuan; Truong, Kathy; Song, Ying; Kohn, Michael H.; Nakhleh, Luay (2014)
      One outcome of interspecific hybridization and subsequent effects of evolutionary forces is introgression, which is the integration of genetic material from one species into the genome of an individual in another species. ...
    • Individual and combined effects of two types of phenological shifts on predator–prey interactions 

      Rasmussen, Nick L.; Rudolf, Volker H.W. (2016)
      Timing of phenological events varies among years with natural variation in environmental conditions and is also shifting in response to climate change. These phenological shifts likely have many effects on species interactions. ...
    • Insect seed predators as novel agents of selection on fruit color 

      Stanton, Maureen L; Whitney, Kenneth D (2004-08)
      The ecological and evolutionary dynamics of fruit color polymorphisms remain poorly known because patterns and agents of selection have rarely been identified. Here, we examine Acacia ligulata, a shrub of the Australian ...
    • Intraspecific priority effects and disease interact to alter population growth 

      Dibble, Christopher J.; Hall, Spencer R.; Rudolf, Volker H.W. (2014)
      Intraspecific variation may shape colonization of new habitat patches through a variety of mechanisms. In particular, trait variation among colonizing individuals can produce intraspecific priority effects (IPEs), where ...
    • Joint assembly and genetic mapping of the Atlantic horseshoe crab genome reveals ancient whole genome duplication 

      Nossa, Carlos W.; Havlak, Paul; Yue, Jia-Xing; Lv, Jie; Vincent, Kimberly Y.; Brockmann, H. Jane; Putnam, Nicholas H. (2014)
      Horseshoe crabs are marine arthropods with a fossil record extending back approximately 450 million years. They exhibit remarkable morphological stability over their long evolutionary history, retaining a number of ancestral ...
    • Linking phenological shifts to species interactions through size-mediated priority effects 

      Rasmussen, Nick L.; Van Allen, Benjamin G.; Rudolf, Volker H.W. (2014)
      Interannual variation in seasonal weather patterns causes shifts in the relative timing of phenological events of species within communities, but we currently lack a mechanistic understanding of how these phenological ...
    • Low coverage sequencing of three echinoderm genomes: the brittle star Ophionereis fasciata, the sea star Patiriella regularis, and the sea cucumber Australostichopus mollis 

      Long, Kyle A.; Nossa, Carlos W.; Sewell, Mary A.; Putnam, Nicholas H.; Ryan, Joseph F. (2016)
      BACKGROUND: There are five major extant groups of Echinodermata: Crinoidea (feather stars and sea lillies), Ophiuroidea (brittle stars and basket stars), Asteroidea (sea stars), Echinoidea (sea urchins, sea biscuits, and ...